4.2 Servers and Freeware

Servers

• 123D
  http:// 123d.ncifcrf.gov/123D+.html
• 3D-PSSM
  http://www.sbg.bio.ic.ac.uk/~3dpssm/
• PHD Threader
  http://www.embl-heidelberg.de/predictprotein/predictprotein.html
• UCLA-DOE
  http://fold.doe-mbi.ucla.edu/

Freeware

• THREADER
  http://globin.bio.warwick.ac.uk/~jones/threader.html
• NCBI threading software
  http://bioinf.cs.ucl.ac.uk/threader/threader.html

4.3 Threading: Example