| SEQUENCE DATABASES & TOOLS | |
| 2D STRUCTURE PREDICTION NNPREDICT PSA |
Lotto: your chances
are 7/10 Requires one sequence - Cohen @ UCSF Boston U. |
| ALIGNMENT BLAST DEAMBULUM SAM | Searching for similarity Basic Local Alignment Search Tool@ NLM Pattern searches @ UCSC |
| DATABASE ACCESS Entrez Sanger Centre SWISS-PROT WD-Repeats |
Hunting for sequences NLM's gateway Genomes, genomes ... My favorite Beta-propellers a gogo |
| IN VIVO O-glycosylation PSORT SignalP |
Who knows about protein's
fate? OH's in trouble ... Prediction of protein localization sites in cells Prediction of signal peptide cleavage |
| THREADING 123D HMM PROSPECTOR TOPITS THREADER UCLA-DOE THREADER |
Does you sequence
fit to a known fold? @ NCI @ UCSC Jeffrey Skolnick's brain-child @ EMBL Dr. Jones, now @ UCL Dr. Fisher @ UCLA |
| COMPARATIVE MODELING GENO3D |
Aka composting ... Server in Lyon |
| TOOLS ABIM BIR ExPASy PROLYSIS UW Health Links MolBio |
There is more to
it ... Atelier Bioinformatique Superb tools Genomes ... analyzed Protease cleavage server Links compiled by UW HS gurus |