Res. #: Sequence Numbers for human fibrinogen gamma chains.
FbG_Hu: P02679, Human (Homo sapiens) fibrinogen gamma-A chain, residues 143-411.
FbH_Hu: P04469, Human fibrinogen gamma-B (gamma prime) chain, residues 143-427.
FbG_Bo: P12799, Bovine (Bos taurus) fibrinogen gamma-B chain (gamma prime), residues 143-420.
FbG_Rt: P02680, Rat (Rattus norvegicus) fibrinogen gamma-A and B chain, residues 144-420.
FbG_Xe: P17634, African Clawed Frog (Xenopus laevis) fibrinogen gamma-chain, residues 141-413.
FbG_SL: P04115, Sea Lamprey (Petromyzon marinus) fibrinogen gamma chain, residues 144-408.
FbB_Hu: P02675, Human fibrinogen beta chain, residues 201-461.
FbB_Rt: P14480, Rat fibrinogen beta chain (fragments), residues 58-310.
FbB_Bo: P02676, Bovine fibrinogen beta chain, residues 187-447.
FbB_Ck: Q02020, Chicken (Gallus gallus) fibrinogen beta chain (fragment), residues 205-463.
FbB_SL: P02678, Sea Lamprey fibrinogen beta chain (fragment), residues 220-477.
FbE_Hu: B44234, Human alpha chain, extended form - (alpha_E) residues 18-262.
Fb2_SL: P33573, Sea Lamprey fibrinogen alpha-2 chain, residues 371-617.
FbR_Hu: JN0596, Human fibrinogen-related protein HFREP-1, residues 73-312.
T49_Hu: S47273, Human pT49 fbg-like T-lymphocyte protein, residues 203-439.
FbX_Ms: P12804, Mouse (Mus musculus) cytotoxic T-lymphocyte specific protein, residues 177-413.
SCA_Dr: P21520, Drosophila melanogaster Scabrous protein, residues 488-689.
Fic_Hu: Human ficolin, J.Biol.Chem. 271:2448(1996), residues 99-313.
FiA_Po: A47172, Porcine (Sus scrofa) ficolin Alpha, residues 109-323.
FiB_Po: B47172, Porcine ficolin Beta, residues 112-326.
FbA_SC: P19477, Sea Cucumber (Parastichopus parvimensis) fibrinogen-like protein A (FREP-A), residues 36-258.
TnH_Po: S28170, Porcine tenascin homolog, (fragment), residues 1-220.
TnR_Hu: Human tenascin-R, janusin, J1-160/180, J.Biol.Chem. 271:8157(1996), residues 1128-1358.
TnN_Rt: S32023, Rat neural recognition molecule J1-160/180, residues 1126-1356.
TnN_Ck: JH0675, Chicken restrictin,neural extracellular matrix, residues 1123-1353.
FbL_Hu: P22105, A40701, Human XB gene overlapping P450c21B, residues 596-820.
TnA_Hu: P24821, Human tenascin residues 1953-2177.
TnA_Po: S19694, Porcine tenascin precursor, residues 1521-1746.
TnA_Ms: JQ1322, Mouse tenascin precursor, residues 1794-2019.
TnA_Ck: P10039, Chicken tenascin precursor, residues 1583-1808.
Ident.: Identities: *, 9, 8, 7, 6, 5, 4, 3, 2, 1 = 30, 29, 28, 27, 26, 25, 24, 23, 22, 21 sequence identities.
Conse.: Majority Consensus Sequence. 30 proteins in family, Capitol letters have > 15 sequence identities.
Res. #: Sequence Numbers for human fibrinogen gamma chains.
Sec.S.: Combination of Secondary structure from DSSP and H-bond structure from Yee et. al. Strand b1 of domain B begins with e at residue 192. Codes: H = Alpha Helix; E = Beta-Strand; B = Beta-Bridge; G = 3-Helix; T = 3, 4, or 5 Turn; S = Bend.
Non_id: + indicates non-identical Secondary Structure assignment among the five determinations.
As_con: Consensus surface accesibility: B, b, m, a, A = 0-10, 10-30, 30-70, 70-90, 90-100 % Accessibility, from DSSP combined with Gly-X-Gly accessibility.
Non_id: + indicates non-identical As assignment among the four determinations from DSSP combined with Gly-X-Gly accessibility.
Colors: (a) Protein sequences: green, 30 identities;
cyan, 26-29 identities,
exceptions are blue;
red, identical within phylogenetic group.
(b) Secondary structure and accessibility:
magenta, alpha helices;
blue, beta strands.
We would especially like to thank Brian A. Fox for the preparation of these Web documents.