CrystaLinks - Validation Tools

Web sites

AQUA - Validation of NMR structures

bmrb.wisc.edu/~jurgen/aqua

Compares calculated and observed NOEs, output uses PROCHECK-NMR

ENDscript

http://genopole.toulouse.inra.fr/ENDscript

reads a PDB files and sends back infomation on secondary structure, hydropathy, protein-protein contacts and residue similarities.

MolProbity - Richardson group validation server

http://kinemage.biochem.duke.edu/molprobity/

Richardson validation tools web page.

PROCHECK, PROVE, WHATIF - Biotech validation server

biotech.embl-heidelberg.de:8400/

biotech.ebi.ac.uk:8400/

PARVATI

www.bmsc.washington.edu/parvati
analysis of anisotropic thermal parameters in protein refinements

RCSB

pdb.rutgers.edu/validate/
ADIT validation check prior to PDB deposition

TWINNING

www.doe-mbi.ucla.edu/Services/Twinning
Merohedral twinning detection server

VERIFY3D

www.doe-mbi.ucla.edu/Services/Verify3D.html

WHATCHECK

www.sander.embl-heidelberg.de/pdbreport
precompiled structure validation reports on all PDB entries