From yaya@bernstein-plus-sons.com Mon Dec 5 18:13:01 2005 Received: via tmail-2000(13) (invoked by user merritt) for merritt; Mon, 5 Dec 2005 18:13:16 -0800 (PST) Received: from mxe7.u.washington.edu (mxe7.u.washington.edu [140.142.32.169]) by cg12.u.washington.edu (8.13.5+UW05.10/8.13.5+UW05.09) with ESMTP id jB62DCmB012205 for ; Mon, 5 Dec 2005 18:13:12 -0800 Received: from relay00.pair.com (relay00.pair.com [209.68.5.9]) by mxe7.u.washington.edu (8.13.5+UW05.10/8.13.5+UW05.09) with SMTP id jB62DAgC030735 for ; Mon, 5 Dec 2005 18:13:11 -0800 Received: (qmail 1399 invoked by uid 0); 6 Dec 2005 02:13:10 -0000 Received: from unknown (HELO ?192.168.2.101?) (unknown) by unknown with SMTP; 6 Dec 2005 02:13:10 -0000 X-pair-Authenticated: 24.45.118.7 Mime-Version: 1.0 Message-Id: In-Reply-To: References: Date: Mon, 5 Dec 2005 21:13:01 -0500 To: merritt@u.washington.edu From: "Herbert J. Bernstein" Subject: Re: [ccp4bb]: BibTeX file of common crystallographic citations? (fwd) Content-Type: text/plain; charset="us-ascii" ; format="flowed" X-Uwash-Spam: Gauge=IIIIIII, Probability=7%, Report='__CT 0, __CTYPE_CHARSET_QUOTED 0, __CT_TEXT_PLAIN 0, __HAS_MSGID 0, __MIME_TEXT_ONLY 0, __MIME_VERSION 0, __SANE_MSGID 0' X-UID: 48105 X-Length: 42230 Dear Ethan, I am not sure what you intend by the phrase "collection of common crystallographic citations." Here is a bibtex file Frances and I used for a book chapter on Structural Databases for Arthur Lesk. Regards, Herbert @techreport{ADSC:97, key = "Quantum 4", title =" Quantum 4R Specifications", type = "web page", note="http://www.adsc-xray.com/Q4techspecs.html", institution="Area Detector Systems Corporation", City="Poway. CA", year=1997 } @article{Allen_et_al:73, author = "F. H. Allen and O. Kennard and W. D. S. Motherwell and W. G. Town and D. G. Watson", title = "Cambridge Crystallographic Data Centre. II. Structural Data File", journal = "J. Chem. Doc.", volume = "13", pages = "119 -- 123", year = 1973} @book{Aho_et_al:87, author = "Alfred V. Aho and John E. Hopcroft and Jeffrey D. Ullman", title = "Data Structures and Algorithms", series = "Computer Science and Information Processing", publisher = "Addison-Wesley", City = "Reading, MA", year = 1987 } @article{Andrews:87, author = "Nancy Andrews", title = "Rich Text Format Standard Makes Transferring Text Easier ", journal = "Microsoft Systems Journal", volume = "2", pages = "63 -- 67", year = 1987 } @inBook{Berman_Westbrook:03, key="Ch. 4.X", editor="S. R. Hall and B. McMahon", author = "Helen M. Berman and John D. Westbrook", series="International Tables For Crystallography", title="Volume G: Definition and Exchange of Crystallographic Data", chapter="4.X MACROMOLECULAR EXCHANGE DICTIONARY (pdbx)", publisher="Kluwer Academic Publishers", City="Dordrecht", year=2004 } @inBook{Bernstein:03, key="Ch. 3.7", editor="S. R. Hall and B. McMahon", author = "H. J. Bernstein", series="International Tables For Crystallography", title="Volume G: Definition and Exchange of Crystallographic Data", chapter="3.7. Classification and use of image data", publisher="Kluwer Academic Publishers", City="Dordrecht", year=2004 } @techreport{Bernstein:97a, author = "Herbert J. Bernstein", title = "cif2cif -- CIF Copy Program", institution = "Bernstein + Sons", type = "software", note = "included in http://www.bernstein-plus-sons.com/software/ciftbx", year = 1997} @conference{Bernstein_Bernstein:96, author="F. C. Bernstein and H. J. Bernstein", title="Translating mmCIF Data into PDB Entries", organization="IUCr", institution="IUCr", location="Seattle, WA", note="presented at CIF workshop at Seattle IUCr meeting, 7-17 August 1996. Software available at http://www.bernstein-plus-sons.com/software/cif2pdb", year = 1996 } @conference{Bernstein_Bernstein:02, author= "H. J. Bernstein and F. C. Bernstein", title = "Yaxdf and the Interaction between CIF and XML", organization = "XIX Congress and General Assembly of the International Union of Crystallography", location = "Geneva, Switzerland", month= "August", year = "2002", journal = "Acta Cryst.", volume = "A58 (Supplement)", pages = "C257" } @article{Bernstein_Bernstein_Bourne:98, author="H. J. Bernstein and F. C. Bernstein and P. E. Bourne", title="CIF Applications. VIII. pdb2cif: Translating PDB Entries into mmCIF Format", journal="J. Appl. Cryst.", note="Software available at http://www.bernstein-plus-sons.com/software/pdb2cif", volume="31", pages="282 -- 295", year=1998 } @inBook{Bernstein_Ellis:03, key="Ch. 5.6", editor="S. R. Hall and B. McMahon", author = "P. J. Ellis and H. J. Bernstein", series="International Tables For Crystallography", title="Volume G: Definition and Exchange of Crystallographic Data", chapter="5.6. CBFlib: an ANSI C library for manipulating image data", publisher="Kluwer Academic Publishers", City="Dordrecht", year=2004 } @inBook{Bernstein_Hall:03, key="Ch. 5.4", editor="S. R. Hall and B. McMahon", author = "H. J. Bernstein and P. R. Hall", series="International Tables For Crystallography", title="Volume G: Definition and Exchange of Crystallographic Data", chapter="5.4 CIFTBX: Fortran tools for manipulating CIFs", publisher="Kluwer Academic Publishers", City="Dordrecht", year=2004 } @article{Bernstein_Hall:98, author="H. J. Bernstein and S. R. Hall", title="CIF Applications. VII CYCLOPS2: Extending the Validation of CIF Data Names", journal="J. Appl. Cryst.", note="Software available at http://www.bernstein-plus-sons.com/software/ciftbx/cyclops.src", volume="31", pages="278 -- 281", year=1998 } @inBook{Bernstein_Hammersley:03, key="Ch. 2.3", editor="S. R. Hall and B. McMahon", author = "H. J. Bernstein and A. P. Hammersley", series="International Tables For Crystallography", title="Volume G: Definition and Exchange of Crystallographic Data", chapter="2.3. Specification of the Crystallographic Binary File (imgCIF/CBF)", publisher="Kluwer Academic Publishers", City="Dordrecht", year=2004 } @article{Bernstein_et_al:77, author= "F. C. Bernstein and T. F. Koetzle and G. J. B. Williams and E. F. {Meyer, Jr.} and M. D. Brice and J. R. Rodgers and O. Kennard and T. Shimanouchi and M. Tasumi", title = "The Protein Data Bank: a computer-based archival file for macromolecular structures", journal = "J. Mol. Biol.", volume = "112", pages = "535 -- 542", year=1977 } @article{Bourne_Berman_McMahon_Watenpaugh_Westbrook_Fitzgerald:97, author="P. E. Bourne and H. M. Berman and B. McMahon and K. D. Watenpaugh and J. Westbrook and P. M. D. Fitzgerald", title="The Macromolecular Crystallographic Information File (mmCIF)", journal="Methods in Enzymology", volume="277", pages="571 -- 590", year=1997 } @techreport{Bray_Paoli_Sperberg-McQueen:98, author="T. Bray and J. Paoli and C.M. Sperberg-McQueen", key="Bray, Paoli, Sperberg-McQueen", title="Extensible Markup Language (XML)", type = "web page", note="W3C Recommendation 10-Feb-98, REC-xml-19980210, http://www.w3.org/TR/1998/REC-xml-19980210", institution="W3C", year=1998 } @techreport{Bray_et_al:98, author="T. Bray and J. Paoli and C.M. Sperberg-McQueen", key="Bray, Paoli, Sperberg-McQueen", title="Extensible Markup Language (XML)", type = "web page", note="W3C Recommendation 10-Feb-98, REC-xml-19980210, http://www.w3.org/TR/1998/REC-xml-19980210", institution="W3C", year=1998 } @book{CSDUM:78, key = "CSD", title = "Cambridge Crystallographic Database User Manual", publisher = "Crystallographic Data Centre", city = "Cambridge, England", month = "April", year = "1978" } @article{Diamond:71, key = "diamond", author = "R. Diamond", title = "A real-space refinement procedure for proteins", journal = "Acta Cryst.", volume = "A27", pages = "436 -- 452", year = 1971, } @book{Dubuisson:00, author="Olivier Dubuisson", title="ASN.1 Communication between Heterogeneous Systems", note="translated from French by Phillipe Fouquart", publisher = "Morgan Kaufmann", city = "San Francisco", year = "2000", pages = "562" } @inBook{Fitzgerald_et_al:03a, key="Ch. 3.6", editor="S. R. Hall and B. McMahon", author = "P. M. D. Fitzgerald and J. D. Westbrook and P. E. Bourne and B. McMahon and K. D. Watenpaugh and H. M. Berman", series="International Tables For Crystallography", title="Volume G: Definition and Exchange of Crystallographic Data", chapter="3.6. Classification and use of macromolecular data", publisher="Kluwer Academic Publishers", City="Dordrecht", year=2004 } @inBook{Fitzgerald_et_al:03b, key="Ch. 4.5", editor="S. R. Hall and B. McMahon", author = "P. M. D. Fitzgerald and J. D. Westbrook and P. E. Bourne and B. McMahon and K. D. Watenpaugh and H. M. Berman", series="International Tables For Crystallography", title="Volume G: Definition and Exchange of Crystallographic Data", chapter="4.5. Macromolecular dictionary (mmCIF)", publisher="Kluwer Academic Publishers", City="Dordrecht", year=2004 } @article{Flack_Blanc_Schwarzenbach:1992, author = "H. D. Flack and E. Blanc and D. Schwarzenbach", journal = "J. Appl. Cryst.", year = "1992", volume = "25", pages = "455 -- 459" } @techreport{Freed_Borenstein:96a, author = "N. Freed and N. Borenstein", title = "Multipurpose Internet Mail Extensions (MIME) Part One: Format of Internet Message Bodies", institution = "Internet Engineering Task Force", type = "RFC", number = "2045", note = "http://www.ietf.org/rfc/rfc2045.txt", year = 1996 } @techreport{Freed_Borenstein:96b, author = "N. Freed and N. Borenstein", title = "Multipurpose Internet Mail Extensions (MIME) Part Two: Media Types", institution = "Internet Engineering Task Force", type = "RFC", number = "2046", note = "http://www.ietf.org/rfc/rfc2046.txt", year = 1996 } @techreport{Freed_Klensin_Postel:96, author = "N. Freed and J. Klensin and J. Postel", title = "Multipurpose Internet Mail Extensions (MIME) Part Four: Registration Procedures", institution = "Internet Engineering Task Force", type = "RFC", number = "2048", note = "http://www.ietf.org/rfc/rfc2048.txt", year = 1996 } @techreport{Freed_Borenstein:96c, author = "N. Freed and N. Borenstein", title = "Multipurpose Internet Mail Extensions (MIME) Part Five: Conformance Criteria and Examples", institution = "Internet Engineering Task Force", type = "RFC", number = "2049", note="http://www.ietf.org/rfc/rfc2049.txt", year = 1996 } @article{Hall_Allen_Brown:91, author = "S. R. Hall and F. H. Allen and I. D. Brown", title = "The Crystallographic Information File (CIF): a New Standard Archive File. for Crystallography", journal = "Acta Cryst.", volume = "A47", pages = "655 -- 685", year = 1991 } @article{Hall:91, author="S. R. Hall", title="The STAR File: A New Format for Electronic Data Transfer and Archiving", journal= "J. Chem. Inform. Comp. Sci.", volume="31", pages="326 -- 333", year=1991 } @article{Hall:93a, author="S. R. Hall", title="CIF Appl. II. CIFIO: for CIF Input/Output in the Xtal System", journal="J. Appl. Cryst.", volume="26", pages="474 -- 479", year=1993 } @article{Hall:93b, author="S. R. Hall", title="CIF Appl. III. CYCLOPS: for validating CIF Data Names", journal="J. Appl. Cryst.", volume="26", pages="480 -- 481", year=1993 } @article{Hall:93c, author="S. R. Hall", title="CIF Appl. IV. CIFtbx: A Toolbox for Manipulating CIF's", journal="J. Appl. Cryst.", volume="26", pages="482 -- 494", year=1993 } @article{Hall_Bernstein:96, author="S. R. Hall and H. J. Bernstein", title="CIF Applications. CIFtbx2: Extended Tool Box for Manipulating CIFs", journal="J. Appl. Cryst.", volume="29", pages="598--603", year=1996 } @inBook{Hall_McMahon:03, key="Ch. 1.1", editor="S. R. Hall and B. McMahon", author = "S. R. Hall and B. McMahon", series="International Tables For Crystallography", title="Volume G: Definition and Exchange of Crystallographic Data", chapter="1.1. Genesis of the Crystallographic Information File", publisher="Kluwer Academic Publishers", City="Dordrecht", year=2004 } @inBook{Hall_Westbrook:03, key="Ch. 2.2", editor="S. R. Hall and B. McMahon", author = "S. R. Hall and J. D. Westbrook", series="International Tables For Crystallography", title="Volume G: Definition and Exchange of Crystallographic Data", chapter="2.2. Specification of the Crystallographic Information File", publisher="Kluwer Academic Publishers", City="Dordrecht", year=2004 } @techreport{Hall_King_Stewart:95, author="S. R. Hall and G. D. S. King and J. M. Stewart", title="Xtal 3.4 Users Manual. Report", type = "manual", institution="University of Western Australia", year=1995 } @article{Hall_Cook:95, author="S. R. Hall and A. P. F. Cook", title="Data Definition Language for STAR File Dictionaries", journal="J. Chem. Inform. Comp. Sci.", volume="R35", page="819 -- 825", year=1995 } @article{Hall_Sievers:93, author = "S. R. Hall and R. Sievers", title= "CIF applications. I. QUASAR: for extracting data from a CIF", journal = "J. Appl. Cryst.", volume = "26", pages = "469 -- 473", year= 1993 } @article{Hall_Spadaccini:94, author="S. R. Hall and N. Spadaccini", title="The STAR File: Detailed Specifications", journal="J. Chem. Inform. Comp. Sci.", volume="34", pages="505 -- 508", year=1994 } @techreport{Hammersley:97, author = "A. P. Hammersley", title = "FIT2D: An Introduction and Overview", institution = "ESRF", type = "ESRF Internal Report", number = "ESRF97HA02T", year = 1997 } @inBook{Hammersley_Bernstein_Westbrook:03, key="Ch. 4.6", editor="S. R. Hall and B. McMahon", author = "A. P. Hammersley and H. J. Bernstein and J. D. Westbrook", series="International Tables For Crystallography", title="Volume G: Definition and Exchange of Crystallographic Data", chapter="4.6. Image dictionary (imgCIF)", publisher="Kluwer Academic Publishers", City="Dordrecht", year=2004 } @article{Heller_Milne_Feldmann:77, author = "S. R. Heller and G. W. A. Milne and R. J. Feldmann", title = "A computer-based chemical information system", journal = "Science", volume = "195", pages = "253 -- 259", year = 1977 } @article{Hester_Okamura:98, author = "J. R. Hester and F. P. Okamura", journal = "J. Appl. Cryst.", year = "1998", volume = "31", pages = "965 -- 968", title = "CIF Applications. X. Automatic Construction of CIF Input Functions: CifSieve" } @techreport{HTML:89, author = "T. Berners-Lee", title = "Information management: A proposal", type = "proposal", year = "1989", month = "March", institution = "CERN", note = "see http://www.w3.org/History/1989/proposal.html"} @techreport{IEEE:85, key="IEEE", title = "IEEE Standard for Binary Floating--Point Arithmetic", type="ANSI/IEEE Std", number="754--1985", institution="Institute of Electrical and Electronics Engineers, Inc.", author = "IEEE", city="NY", year=1985} @techreport{Johnson:75, author = "S. C. Johnson", title = "YACC: Yet another Compiler-Compiler", note = "also in UNIX Programmer's Manual, Supplementary Documents, 4.2 Berkeley Software Distribution, Virtual VAX-11 Version, March 1984", type = "manual", number = "32", year = "1975", institution = "Bell Laboratories", location = "Murray Hill, NJ", } @techreport{Lesk_Schmidt:75, author = "M. E. Lesk and E. Schmidt", title = "Lex - A Lexical Analyzer Generator", note = "also in UNIX Programmer's Manual, Supplementary Documents, 4.2 Berkeley Software Distribution, Virtual VAX-11 Version, March 1984", type = "manual", number = "39", year = "1975", institution = "Bell Laboratories", location = "Murray Hill, NJ", } @techreport{Keller:96, author="P. A. Keller", title="A mmCIF Toolbox for CCP4 Applications", type="workshop presentation", organization="IUCr", institution="IUCr", location="Seattle, WA", note="CIF workshop at Seattle IUCr meeting, 7-17 August 1996. abstract E0726", year = 1996 } @article{Klosowski_et_al:97, author = "P. Klosowski and M. Koennecke and J. Z. Tischler and R. Osborn", title="NeXus: A common format for the exchange of neutron and synchrotron data", journal = "Physica B: Condensed Matter", volume = "B 241-243", pages = "151 -- 153", year = 1997 } @book{Knuth:84, author = "Donald E. Knuth", title = "The \TeX Book", year = "1984", publisher = "Addison-Wesley", pages = 483, city = "Reading, Mass."} @book{Lycos:75, title="Computer Networking and Chemistry", editor="Peter Lykos", series = "ACS Symposium Series", volume = 19, publisher = "American Chemical Society", city = "Washington", pages = 237, year = 1975 } @techreport{MAR:97, key="MAR 345", title="The mar345 Image Plate Detector", type = "web page", note="http://www.marresearch.com/ip.htm", institution="MAR Research", city="Norderstedt, Germany", year=1997 } @inBook{McMahon:03, key="Ch. 5.3", editor="S. R. Hall and B. McMahon", author = "B. McMahon", series="International Tables For Crystallography", title="Volume G: Definition and Exchange of Crystallographic Data", chapter="5.3. Syntactic utilities for CIF", publisher="Kluwer Academic Publishers", city="Dordrecht", year=2004 } @article{Moffat_Bell_Witten:97, author="A. Moffat and T. C. Bell and I. H. Witten", title = "Lossless compression for text and images", journal = "International Journal of High Speed Electronics and Systems", volume = "8", pages = "179 -- 231", year = 1997 } @techreport{Moore:96, author = "K. Moore", title = "MIME (Multipurpose Internet Mail Extensions) Part Three: Message Header Extensions for Non-ASCII Text", institution = "Internet Engineering Task Force", type = "RFC", number = "2047", note = "http://www.ietf.org/rfc/rfc2047.txt.", year = 1996 } @article{Murray-Rust_Rzepa:99, author="P. Murray-Rust and H. Rzepa", title= "Chemical markup, XML and the WWW, Part I: Basic principles", journal = "J. Chem. Inf . Comp. Sci", volume = "39", number = "6", pages="928 -- 942", year = 1999 } @techreport{NCSA:93, author = "NCSA", title = "NCSA HDF: Specification and Developer's Guide", type = "manual", institution = "University of Illinois at Urbana-Champaign", note = " Version 3.2", year = 1993 } @article{Ohkawa_Ostell_Bryant:95, author = "H. Ohkawa and J. Ostell and S. Bryant", year = "1995", title = "{MMDB}: An {ASN.1} specification for macromolecular structure", journal = "ISMB", volume = "3", pages = "259 -- 267" } @techreport{Rivest:92, author = "R. Rivest", title = "The MD5 Message-Digest Algorithm", institution = "Internet Engineering Task Force", type = "RFC", number = "1321", note="http://www.ietf.org/rfc/rfc1321.txt", year = 1992 } @book{PDB_newsletter_1:74, key = "PDB Newsletter 1", year = 1974, title = "{PDB Newsletter}", month = "September", institution = "Brookhaven National Laboratory", publisher = "Brookhaven National Laboratory", city = "Upton, NY", pages = 20} @book{PDB_newsletter_2:76, key = "PDB Newsletter 2", year = 1976, title = "{PDB Newsletter}", month = "March", institution = "Brookhaven National Laboratory", publisher = "Brookhaven National Laboratory", city = "Upton, NY", pages = 4} @book{PDB_newsletter_3:76, key = "PDB Newsletter 3", year = 1976, title = "{PDB Newsletter}", month = "November", institution = "Brookhaven National Laboratory", publisher = "Brookhaven National Laboratory", city = "Upton, NY", pages = 6} @book{PDB_newsletter_4:77, key = "PDB Newsletter 4", year = 1977, title = "{PDB Newsletter}", month = "May", institution = "Brookhaven National Laboratory", publisher = "Brookhaven National Laboratory", city = "Upton, NY", pages = 8} @book{PDB_newsletter_5:77, key = "PDB Newsletter 5", year = 1977, title = "{PDB Newsletter}", month = "November", institution = "Brookhaven National Laboratory", publisher = "Brookhaven National Laboratory", city = "Upton, NY", pages = 6} @book{PDB_newsletter_10:79, key = "PDB Newsletter 10", year = 1979, title = "{PDB Newsletter}", month = "October", institution = "Brookhaven National Laboratory", publisher = "Brookhaven National Laboratory", city = "Upton, NY", pages = 6} @book{PDB_newsletter_37:86, key = "PDB Newsletter 37", year = 1986, title = "{PDB Newsletter}", month = "July", institution = "Brookhaven National Laboratory", publisher = "Brookhaven National Laboratory", city = "Upton, NY", pages = 6} @book{PDB_newsletter_44:88, key = "PDB Newsletter 44", year = 1988, title = "{PDB Newsletter}", month = "April", institution = "Brookhaven National Laboratory", publisher = "Brookhaven National Laboratory", city = "Upton, NY", pages = 6} @book{PDB_newsletter_46:88, key = "PDB Newsletter 46", year = 1988, title = "{PDB Newsletter}", month = "October", institution = "Brookhaven National Laboratory", publisher = "Brookhaven National Laboratory", city = "Upton, NY", pages = 6} @book{PDB_newsletter_47:89, key = "PDB Newsletter 47", year = 1989, title = "{PDB Newsletter}", month = "January", institution = "Brookhaven National Laboratory", publisher = "Brookhaven National Laboratory", city = "Upton, NY", pages = 8} @book{PDB_newsletter_48:89, key = "PDB Newsletter 48", year = 1989, title = "{PDB Newsletter}", month = "April", institution = "Brookhaven National Laboratory", publisher = "Brookhaven National Laboratory", city = "Upton, NY", pages = 8} @book{PDB_newsletter_50:89, key = "PDB Newsletter 50", year = 1989, title = "{PDB Newsletter}", month = "October", institution = "Brookhaven National Laboratory", publisher = "Brookhaven National Laboratory", city = "Upton, NY", pages = 8} @book{PDB_newsletter_51:90, key = "PDB Newsletter 51", year = 1990, title = "{PDB Newsletter}", month = "January", institution = "Brookhaven National Laboratory", publisher = "Brookhaven National Laboratory", city = "Upton, NY", pages = 8} @book{PDB_newsletter_53:90, key = "PDB Newsletter 53", year = 1990, title = "{PDB Newsletter}", month = "July", institution = "Brookhaven National Laboratory", publisher = "Brookhaven National Laboratory", city = "Upton, NY", pages = 9} @book{PDB_newsletter_55:91, key = "PDB Newsletter 55", year = 1991, title = "{PDB Newsletter}", month = "January", institution = "Brookhaven National Laboratory", publisher = "Brookhaven National Laboratory", city = "Upton, NY", pages = 10} @book{PDB_newsletter_59:92, key = "PDB Newsletter 59", year = 1992, title = "{PDB Newsletter}", month = "January", institution = "Brookhaven National Laboratory", publisher = "Brookhaven National Laboratory", city = "Upton, NY", pages = 37} @book{PDB_newsletter_67:94, key = "PDB Newsletter 67", year = 1994, title = "{PDB Newsletter}", month = "January", institution = "Brookhaven National Laboratory", publisher = "Brookhaven National Laboratory", city = "Upton, NY", pages = 28} @book{PDB_newsletter_69:94, key = "PDB Newsletter 69", year = 1994, title = "{PDB Newsletter}", month = "July", institution = "Brookhaven National Laboratory", publisher = "Brookhaven National Laboratory", city = "Upton, NY", pages = 22} @book{PDB_newsletter_70:94, key = "PDB Newsletter 70", year = 1994, title = "{PDB Newsletter}", month = "October", institution = "Brookhaven National Laboratory", publisher = "Brookhaven National Laboratory", city = "Upton, NY", pages = 11} @article{Spadaccini_Hall:94, author="N. Spadaccini and S. R. Hall", title="Star_Base: Accessing STAR File Data", journal="J. Chem. Inform. Comp. Sci.", volume="34", pages="509 -- 516", year=1994 } @techreport{Stampf:94, author = "D. R. Stampf", title = "ZINC -- Galvanizing CIF to work with UNIX", type = "manual", institution = "Protein Data Bank, Brookhaven National Laboratory", city = "Upton, NY", year = "1994" } @techreport{SGML:86, key = "SGML", title= "International Standard ISO 8879 Information Processing - Text and Office Systems - Standardized Generalized Markup Language (SGML), First Edition", type = "standard", year = "1986", note = "1986-10-15 UDC 681.3.06 Ref. No. ISO 8879-1986(E)", institution = "International Organization for Standardization"} @techreport{Tosic_Westbrook:98, author = "O. Tosic and J. D. Westbrook", title="CIFPARSE: A Library of Access Tools for mmCIF, Reference Guide", type = "manual", number="Version 3.01", note="http://pdb.rutgers.edu/mmcif/CIFPARSE/cifparse/cifparse.html", institution="Nucleic Acid Database Project, Dept. of Chemistry, Rutgers, The State University of NJ", year=1998 } @techreport{Walters_Stahl:94, author = "P. Walters and M. Stahl", title = "BABEL Reference Manual", type = "manual", institution = "Dolata Research Group, Department of Chemistry, University of Arizona", note = "Version 1.06", year = 1994} @inBook{Westbrook:03, key="Ch. 5.5", editor="S. R. Hall and B. McMahon", author = "John D. Westbrook", series="International Tables For Crystallography", title="Volume G: Definition and Exchange of Crystallographic Data", chapter="5.5. Tools for manipulating macromolecular data", publisher="Kluwer Academic Publishers", City="Dordrecht", year=2004 } @techreport{Westbrook_Hall:95, author="J. Westbrook and S. R. Hall", title = "A Dictionary Description Language for Macromolecular Structure, Draft DDL V 2.1.0", note="http://www.iucr.org/iucr-top/cif/ddl/index.html", type = "manual", institution="IUCr COMCIFS", city="Dordrecht", year = 1995 } @article{Westbrook_Hsieh_Fitzgerald:97, author="J. D. Westbrook and S.-H. Hsieh and P. M. D. Fitzgerald", title = "CIFLIB: An Application Program Interface to CIF Dictionaries and Data Files", journal = "J. Appl. Cryst.", volume = "30", pages = "79 -- 83", year = 1997 } @techreport{X.680:94, key = "X.680", title = "Information technology - Abstract Syntax Notation One (ASN.1): Specification of basic notation", type = "ITU standard", institution = "International Telecommunications Union", year = 1994} @article{Orengo_et_al:97, author="C. A. Orengo and A. D. Michie and S. Jones and D. T. Jones and M. B. Swindells and J. M. 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Koetzle and E. F. Meyer Jr. and C. N. Morimoto and S. Sevian and R. K. Stodola and M. M. Strongson and T. V. Willoughby", chapter = "{CRYSNET} -- A Network of Intelligent Remote Graphics Terminals", title = "Second Annual AEC Scientific Computer Information Exchange Meeting, Proceedings of the Technical Program", year = "1974", pages = "149 -- 161", note = "Brookhaven National Laboratory Report \#18803."} @article{Andrews_Bernstein:79, author = "L. C. Andrews and H. J. Bernstein", title = "The {NIH-EPA} Chemical Information System", journal = "ONLINE", month = "March", year = "1979", pages = "35 -- 49"} @article{Bairoch_Apweiler:00, author = "A. Bairoch and R. Apweiler", title = "The {Swiss-Prot} protein sequence data bank and its supplement {TrEMBL} in 2000", journal = "Nucleic Acids Research", volume = "28", pages = "45 -- 48", year = "2000" } @article{Wu_et_al:03, author = "C. H. Wu and L.-S. L. Yeh and H. Huang and L. Arminski and J. Castro-Alvear and Y. Chen and Z.-Z. Hu and R. 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Mondragon and S. C. Harrison", title = "The phage 434 {Cro/OR1} complex at 2.5 {A} resolution", journal = "J. Mol. Biol.", volume = "219", number = "2", pages = "321 -- 334", year = "1991", note = "PDB entry 3CRO 29 July 1990"} } @article{Teeter:84, title = "Water Structure of a Hydrophobic Protein at Atomic Resolution. Pentagon Rings of Water Molecules in Crystals of Crambin", author = "M. M. Teeter", journal = "Proc.Nat.Acad.Sci. USA", volume = "81", year = "1984", pages = "6014 -- 6018" } @misc{Hendrickson_Teeter:81, author= " W. A. Hendrickson and M. M. Teeter", note = "PDB Entry {1CRN}, 30 April 1981" } @misc{Dayhoff_et_al:65, key = "dayhoff_a", author = "M. O. Dayhoff and R. V. Eck and M. A. Chang and M. R. Sochard", title = "Atlas of Protein Sequence and Structure, Vol. 1", publisher = "National Biomedical Research Foundation", city = "Silver Spring, MD", pages = "93", year = 1965} @misc{Dayhoff_et_al:78, key = "dayhoff_b", author = "M. O. Dayhoff (editor) and L. T. Hunt and W. C. Barker and R. M. Schwartz and B. C. Orcutt and C. L. Young", title = "Atlas of Protein Sequence and Structure, Vol 5", publisher = "National Biomedical Research Foundation", city = "Silver Spring, MD", pages = "470", year = 1978} At 9:03 PM -0500 12/5/05, Frances C. Bernstein wrote: >===================================================== >**** Bernstein + Sons >* * Information Systems Consultants >**** 5 Brewster Lane, Bellport, NY 11713-2803 >* * *** >**** * Frances C. Bernstein > * *** fcb@bernstein-plus-sons.com > *** * > * *** 1-631-286-1339 FAX: 1-631-286-1999 >===================================================== > >---------- Forwarded message ---------- >Date: Mon, 5 Dec 2005 16:02:58 -0800 >From: Ethan Merritt >To: CCP4 Bulletin Board >Subject: [ccp4bb]: BibTeX file of common crystallographic citations? > >*** For details on how to be removed from this list visit the *** >*** CCP4 home page http://www.ccp4.ac.uk *** > >Can anyone offer to share their collection of common >crystallographic citations in BibTeX format? > > >-- >Ethan A Merritt merritt@u.washington.edu >Biomolecular Structure Center >Mailstop 357742 >University of Washington, Seattle, WA 98195 -- ===================================================== Herbert J. Bernstein, Professor of Computer Science Dowling College, Kramer Science Center, KSC 121 Idle Hour Blvd, Oakdale, NY, 11769 Office: +1-631-244-3035 Lab (KSC 020): +1-631-244-3451 yaya@dowling.edu =====================================================